UBC RDM Workshop 3: Data Publishing and Data Archiving

Utrecht Bioinformatics CenterThe Utrecht Bioinformatics Center (UBC) performs life science research using big data analysis on DNA, genes, proteins and cells. By integrating data from various sources, we develop innovative methods that are at the foundation of solving of important problems in cancer genomics and molecular evolution. The UBC fosters and promotes the bioinformatics community at Utrecht Science Park.Data StewardshipThe Data Stewardship portfolio of the UBC contains regular open consulting hours on research data management (RDM) for members of the Utrecht bioinformatics community.For the first time, a research data management focussed workshop series consisting of four individual sessions will take place in fall and winter 2019.All Data Stewardship related events and services are provided by the Data Steward of the Center for Molecular Medicine of the UMC Utrecht, Jasmin Böhmer.

Jasmin K. Böhmer

<H2 CLASS="p1">UBC Workshop 3: How to advance science by publishing your data in the right manner, at the right place and time.</H2>
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<H2 CLASS="p1">Digital information lasts forever — or five years, whichever comes first!  </H2>
<H6 CLASS="p1">~Jeff Rothenberg (1999)</H6>
 
 
<H3 CLASS="p2">Presentation:</H3>
This session will swiftly show-case the different shapes and formats data is published on the web recently, and what characteristics and benefits each approach has. Thereafter it's time to improve your research exposure with getting an <A HREF="https://orcid.org/" TARGET="_blank" DATA-MSYS-CLICKTRACK="0" REL="nofollow noopener noreferrer">ORCID-ID</A> and <A HREF="https://datacite.org/dois.html" TARGET="_blank" DATA-MSYS-CLICKTRACK="0" REL="nofollow noopener noreferrer">DOIs for your data</A> to enable tools such as <A HREF="https://www.altmetric.com/about-altmetrics/" TARGET="_blank" DATA-MSYS-CLICKTRACK="0" REL="nofollow noopener noreferrer">almetric</A> to log your attention and impact scores.
Secondly, you will learn the basics to take care before and when publishing data online to enable the best citation tracking and discoverability for your peers, your colleagues and the wider public.
 
 
<H3 CLASS="p2">Hands-On:</H3>
The list of available data repositories is long, and sometimes it hard to figure out why you should choose a specific one and not another. Since 2012 <A HREF="https://www.re3data.org/" TARGET="_blank" DATA-MSYS-CLICKTRACK="0" REL="nofollow noopener noreferrer">re3data.org</A> is shaping one of the biggest - perhaps THE biggest- global registry of research data repositories. Where if not here to look for what options you would have to preserve and share your specific research data?
The second and longer interactive session will focus on the Open Science focussed data repository <A HREF="https://zenodo.org/" TARGET="_blank" DATA-MSYS-CLICKTRACK="0" REL="nofollow noopener noreferrer">Zenodo</A> by CERN. If you cannot find a suitable data archive or repository to preserve and publish your data, it will probably find a good long-term home on Zenodo! With the provided testing environment called <A HREF="https://sandbox.zenodo.org/" TARGET="_blank" DATA-MSYS-CLICKTRACK="0" REL="nofollow noopener noreferrer">Zenodo Sandbox</A> we will explore how to upload data to Zenodo and what kind of metadata is necessary to create a meaningfull data-set that still has re-use value in decades. 
 
This session is wrapped up with a discussion and Q&A section.
 
 
<H2 CLASS="p1">In Detail:</H2>
Session: Data Archiving and Data Publishing
Presentation: - From URL to DOI: Types of Data Publications - Essentials of Data Publications - Choose wisely: types of data archives 
Interactive Exercises: - re3data.org exploration - Zenodo Sandbox hands-on
 
Session Plan, Thursday 07th November 2019:
15:00-16:00 
Intro                           Ice-Breaker + Grouping   Presentation                 Break                             re3data.org Exercise          Exercise Discussion
16:00-17:00
Hands-on time for Zenodo Sandbox
17:00
Snack and Drinks
 
<H2>Workshop 3 of 4</H2>
This research data management (RDM) workshop is the third part of a series of four. You can find the other workshops here: 1. Data Management Planning: <A HREF="https://ubc-rdm-workshop1-2019.eventbrite.nl" TARGET="_blank">https://ubc-rdm-workshop1-2019.eventbrite.nl</A> 2. Documentation Writing and ELN: <A HREF="https://ubc-rdm-workshop2-2019.eventbrite.nl" TARGET="_blank">https://ubc-rdm-workshop2-2019.eventbrite.nl</A> 4. FAIR data and SPARQLing Genomics: <A HREF="https://ubc-rdm-workshop4-2019.eventbrite.nl" TARGET="_blank">https://ubc-rdm-workshop4-2019.eventbrite.nl</A> 
 
Header image credit: https://unsplash.com/@nathananderson

Universitair Medisch Centrum Utrecht

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UBC RDM Workshop 3: Data Publishing and Data Archiving

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